Curriculum Vitae

Antigoni Malousi

Laboratory Teaching Staff, School of Medicine

Personal Information

- 2310999163
andigoni@auth.gr
Scopus IDs180607-012721, 012721, 180607
Researcher IDK-3754-2019
PubMed IDmalousi
https://orcid.org/0000-0002-1968-7020
Γνωστικό Αντικείμενο:
Βιοπληροφορική
Επιστημονική Ειδίκευση:
- Θετικές επιστήμες, Μαθηματικά και Πληροφορική
- Πληροφορική
- Επιστήμη της πληροφορικής

Course Work

Courses of Winter semester of 2025–26 academic year

	SCHOOL OF MEDICINE
MD1019	Biochemistry II

	SCHOOL OF DENTISTRY
100506S	Biomedical Data and Artificial Intelligence in Health Sciences

	Iatrikī Mīchanikī kai Plīroforikī
MEI003	Biomedical Data and Machine Learning

	SCHOOL OF MEDICINE
ΙΑ1018	Biochemistry II

	POSTGRADUATE STUDIES PROGRAMME "PRECISION MEDICINE - TRANSLATION RESEARCH AND THERAPEUTICS"
ΙΑΑ03	Bioinformatics

	POSTGRADUATE STUDIES PROGRAMME "RESEARCH METHODOLOGY IN MEDICINE AND IN HEALTH SCIENCES"
ΙΜΑ023	Basic Laboratory Methods and Skills

	Msc in "Applied Microbiology"
ΜΙΜΙΚΑ004	Modern laboratory methodologies – Molecular diagnosis in Medical Microbiology

	Postgraduate Programme of Studies "Health Statistics & Data Analytics"
ΜΙΣΤΑ001	Introduction to Data Analytics

Courses of Spring semester of 2025–26 academic year

	SCHOOL OF DENTISTRY
100403S	Bioinformatics

	MSc in Medical Research Methodology
C3	Basic sciences methodology

	Iatrikī Mīchanikī kai Plīroforikī
MEI008	Physiological modelling
MEI009	Master Thesis

	SCHOOL OF MEDICINE
ΙΑ2017	Bioinformatics with Applications in Medicine

	SCHOOL OF PHARMACY
ΝΠ18-64	Bioinformatics
ΝΠ47	BIOINFORMATICS

	POSTGRADUATE STUDIES PROGRAMME "PRECISION MEDICINE - TRANSLATION RESEARCH AND THERAPEUTICS"
ΙΑΒ06	Bioinformatic tools and applications in -omics technologies

	POSTGRADUATE STUDIES PROGRAMME "RESEARCH METHODOLOGY IN MEDICINE AND IN HEALTH SCIENCES"
ΙΜΒ038	Basic Science Methods

Theses Supervised

Student Theses within AUTh

In progress

Postgraduate

No title
Molecular Determinants of Resistance to Nutlin-3a: The role of p53 signalling
No title
Uncertainty-Aware Immunotherapy Response Prediction via Immune and Genomic Profiling

2025–2026

Postgraduate

A Systematic Review of Uncertainty Estimation Methods in Machine Learning Applied to Biomedical Data.
No title
No title
Attention-based Deep Learning Models for Cancer RNA Sequence Classification
Development of an Integrative Knowledge Graph for Predicting Drug Combination Responses.
Transcriptomic profiles of colorectal cancer: An Individual Patient Data meta-analysis

2024–2025

Postgraduate

GATChip: A Galaxy tool for differential end-to-end Chip-seq data analyses
Identification of Pharmacological Response Biomarkers for Anticancer Drug Combinations Using Computational Methods

2023–2024

Postgraduate

Molecular classification of ovarian carcinomas using multi-omics data integration.

2022–2023

Postgraduate

No title

2019–2020

Postgraduate

Comparative evaluation of Bioinformatics tools for the detection of fusion genes from high-throughput RNA-seq data in haematological malignancies
Evaluation of Bioinformatics tools for the detection of copy number variations from whole-exome sequencing data of patients with neurodevelopmental disorders
Development of a Bioinformatics tool for the prediction of methylation sites from next-generation sequencing and microarray data

Research Projects

Coordinator
2025–2026	Programming skills in R for life scientists
2024–2024	Whole-genome bioinformatic analysis of microbial isolates and comparative metagenomic analysis of microbiomes
2024–2024	Organization of the annual meeting in the frame of the COST ACTION "Information, Coding and Biological Function: The dynamics of life (DYNALIFE)"
2024–2024	Programming skills in R for life scientists
2023–2024	Programming skills in R for life scientists
2023–2024	Metagenomic analysis and investigation of microbiome-host interactions to study the diet effects
2023–2024	Development of computational methods for reverse vaccinology based on the analysis of microbial genomes
2023–2027	Research and development in Bioinformatics
2022–2023	Editing of the book entitled "Computational genomics with R" (Greek translation)
2022–2022	Editing of the book entitled "Computational genomics in R" (Greek translation)
2022–2023	Bioinformatics analysis of whole microbial genomes and comparative metagenomic analysis of microbiomes
2022–2022	Programming skills in R for life scientists

Participant
2025–2028	Sustainable Healthcare with Digital Health Data Competence
2023–2026	EUropean Federation for CAncer IMages
2022–2026	Support to microbiology-related activities about COVID-19 and influenza in Europe, 2022-2026
2022–2027	MSc “Applied Microbiology”
2021–2029	Undergraduate Program Medical studies in English
2021–2026	MSc course in Health Statistics & Data Analytics
2020–2024	A multimodal AI-based toolbox and an interoperable health imaging repository for the empowerment of imaging analysis related to the diagnosis, prediction and follow-up of cancer
2020–2026	Precision Medicine-Translational Research and therapeutics
2018–2028	Master of Science in Medical Research Methodology
2016–2017	Acquisition of Academic Teaching Experience for New Scientists holding a PhD Diploma at Aristotle University of Thessaloniki
2015–2020	MSc in Medical Research Methodology
2011–2026
2008–2013	Compliance and effectiveness in HF and CHD closed-loop management
2007–2026	DEP
2006–2009	Association studies assisted by inference and semantic technologies "ASSIST"

Publications

(2024)

Journal Article

Kotzamanidis Charalampos, Malousi Antigoni, Paraskeva Anastasia, Vafeas George, Giantzi Virginia, Hatzigiannakis Evaggelos, Dalampakis Paschalis, Kinigopoulou Vasiliki, Vrouhakis Ioannis, Zoumpoulis Anastasios, Yiangou Minas, Zdragas Antonios . (2024) . River waters in Greece: A reservoir for clinically relevant extended-spectrum-β-lactamases-producing Escherichia coli . Science of the Total Environment . vol.941 p.Article number: 173554

(2023)

Journal Article

Avgeros Chrysostomos, Patsatsi Aikaterini, Dimitriadis Dimitrios, Malousi Antigoni, Koletsa Triantafyllia, Papathemeli Despoina, Syrnioti Antonia, Avgerou Paraskevi, Lazaridou Elisavet, Tzimagiorgis Georgios, Georgiou Elisavet . (2023) . Dysregulation of Plasma miR-146a and miR-155 Expression Profile in Mycosis Fungoides Is Associated with rs2910164 and rs767649 Polymorphisms . International Journal of Molecular Sciences . vol.24 no.1 p.271
Meletis Georgios, Malousi Antigoni, Tychala Areti, Kassomenaki Angeliki, Vlachodimou Nikoletta, Mantzana Paraskevi, Metallidis Symeon, Skoura Lemonia, Protonotariou Efthymia . (2023) . Probable Three-Species In Vivo Transfer of blaNDM-1 in a Single Patient in Greece: Occurrence of NDM-1-Producing Klebsiella pneumoniae, Proteus mirabilis, and Morganella morganii . Antibiotics . vol.12 no.7 p.1206

(2022)

Journal Article

Kotzamanidis Charalampos, Malousi Antigoni, Dushku Esmeralda, Dobly Alexandre, De Keersmaecker Sigrid C.J., Roosens Nancy H., Karathodorou Argyro, Staikou Alexandra, Zdragas Antonios, Yiangou Minas . (2022) . Listeria monocytogenes isolates from Cornu aspersum snails: Whole genome-based characterization and host-pathogen interactions in a snail infection model . Fish & Shellfish Immunology . vol.123 no.C p.469-478
Protonotariou Efthymia, Meletis Georgios, Malousi Antigoni, Kotzamanidis Charalampos, Tychala Areti, Mantzana Paraskevi, Theodoridou Kalliopi, Ioannidou Maria, Hatzipantelis Emmanouil, Tsakris Athanasios, Skoura Lemonia . (2022) . First detection of mcr-1-producing Escherichia coli in Greece . Journal of Global Antimicrobial Resistance . vol.31 no.C p.252-255

(2021)

Journal Article

Kotzamanidis Charalampos, Vafeas George, Giantzi Virginia, Anastasiadou Sofia, Mygdalias Stavros, Malousi Antigoni, Ekateriniadou Loukia, Sergelidis Daniel, Zdragas Antonios . (2021) . Staphylococcus aureus Isolated from Ruminants with Mastitis in Northern Greece Dairy Herds: Genetic Relatedness and Phenotypic and Genotypic Characterization . Toxins . vol.13 no.3 p.176

(2020)

Journal Article

Kouidou-Andreou Sofia, Malousi Antigoni, Andreou Alexandra-Zoi . (2020) . Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Infection: Triggering a Lethal Fight to Keep Control of the Ten-Eleven Translocase (TET)-Associated DNA Demethylation? . Pathogens . vol.9 no.12 p.1006

(2019)

Journal Article

Kyriakidis K., Charalampidou A., Natsiavas Pantelis, Vizirianakis Ioannis, Malousi Antigoni . (2019) . Linking exome sequencing data with drug response aberrations . Studies in Health Technology and Informatics . vol.264 p.1845-1846
Malousi Antigoni, Kouidou-Andreou Sofia, Tsagiopoulou Maria, Papakonstantinou Nikos, Bouras Emmanouil, Georgiou Elisavet, Tzimagiorgis Georgios, Stamatopoulos Kostas . (2019) . MeinteR: A framework to prioritize DNA methylation aberrations based on conformational and cis-regulatory element enrichment . Scientific Reports . vol.9 no.1
Natsiavas Pantelis, Malousi Antigoni, Bousquet Cédric, Jaulent Marie-Christine, Koutkias Vasileios . (2019) . Computational Advances in Drug Safety: Systematic and Mapping Review of Knowledge Engineering Based Approaches . Frontiers in Pharmacology . vol.10
Tsagiopoulou Maria, Papakonstantinou Nikos, Moysiadis Theodoros, Mansouri Larry, Ljungström Viktor, Duran-Ferrer Martí, Malousi Antigoni, Queirós Ana C., Plevova Karla, Bhoi Sujata, Kollia Panagoula, Oscier David, Anagnostopoulos Achilles, Trentin Livio, Ritgen Matthias, Pospisilova Sarka, Stavroyianni Niki, Ghia Paolo, Martin-Subero Jose I., Pott Christiane, Rosenquist Richard, Stamatopoulos Kostas . (2019) . DNA methylation profiles in chronic lymphocytic leukemia patients treated with chemoimmunotherapy . Clinical Epigenetics . vol.11 no.1

(2007)

Book Chapter

Kouidou-Andreou Sofia, Georgiou Elisavet, Malousi Antigoni, Kyrkou Athena, Kyventidis Anastasios, Fragou Aikaterini, Katopodi Theodora, Magklaveras Nikolaos, Tzimagiorgis Georgios . (2007) . In search of Asymmetric Cytosine Methylation in Exons 5-8 of p53 . Progress in DNA Methylation Research . Επιμέλεια: Hans P. Neumann . p.225-242

Updated: 2026-04-17

Quality Assurance Unit (MODIP)
Aristotle University of Thessaloniki

You are here

Curriculum Vitae

Antigoni Malousi

Courses of Winter semester of 2025–26 academic year

Courses of Spring semester of 2025–26 academic year

Student Theses within AUTh

Postgraduate

Postgraduate

Postgraduate

Postgraduate

Postgraduate

Postgraduate

Journal Article

Journal Article

Journal Article

Journal Article

Journal Article

Journal Article

Book Chapter

Quality Assurance Unit (MODIP)Aristotle University of Thessaloniki

You are here

Curriculum Vitae

Antigoni Malousi

Courses of Winter semester of 2025–26 academic year

Courses of Spring semester of 2025–26 academic year

Student Theses within AUTh

Postgraduate

Postgraduate

Postgraduate

Postgraduate

Postgraduate

Postgraduate

Journal Article

Journal Article

Journal Article

Journal Article

Journal Article

Journal Article

Book Chapter

Quality Assurance Unit (MODIP)
Aristotle University of Thessaloniki